Mapped reads for uncultivated Ruminiclostridium bacterium UBA10951 ge... - SRA

SRX3572412: Mapped reads for uncultivated Ruminiclostridium bacterium UBA10951 genome recovered from SRX691267
1 ILLUMINA (Illumina HiSeq 2000) run: 197,042 spots, 38M bases, 20.3Mb downloads

Design: Reads from SRX691267 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA10951 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

show Abstracthide Abstract

Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Ruminiclostridium bacterium UBA10951 genome recovered from SRX691267

SAMN08019134 • SRS2843382 • All experiments • All runs

Organism: Ruminiclostridium sp.

Library:

Name: UBA10951_library

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 197,042 spots, 38M bases, 20.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR6482562	197,042	38M	20.3Mb	2018-03-05

ID:: 4957914

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Sequence Read Archive

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